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RESCUE2 FAQ
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General
Web site
Results
General
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What is free(dom) software?
Free software is a matter of liberty, not price:
read this
.
Web site
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What is the input format for my spin systems?
The input format MUST BE with one spin system per line like this
(the order does not matter):
H: chemical shifts values C: chemical shift values
N: chemical shifts values
Examples:
H:7.64 C:62.5 N:110
C:173.48 58.1 37.93
N: H: C:173.48 58.1 37.93
The two last examples are equivalent.
Results
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How do i read the results?
Results are given with one prediction per line (spin systems are
numbered), the amino acid types are ordered from the most probable to
the less probable. The probability for each amino acid type is given
in brackets. Only the amino acid types with a probability superior or
equal to 0.01 are displayed.
Example:
3: T (0.43) S (0.34) V (0.07) I (0.05) Y (0.03) C (0.03) F (0.02) Q (0.01) R (0.01) H (0.01)
For the third spin system i provided, the chance to be a threonin
is 43%
I have empty results, what does it mean?
Usually, empty results for some or all the spin systems you provided
are arising when the experiments you chose do not fit the number
and/or the type of chemical shifts you provided. This may be due to
two reasons: 1) you made a mistake, please check that the number and
the types of the chemical shifts you entered are "compatible" with
the experiments you chose. 2) we made a mistake in our NMR
experiments definitions, please drop us an email. We will check and
make the changes if necessary.
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