Names of selected proteins (and corresponding BRMB files) for the training set :
Anantin-A peptide bmr1825.str BSPI-2 bmr1869.str EC [1.1.1.1] bmr1343.str EC [2.3.1.12] bmr1756.str EC [2.3.1.6] bmr2546.str EC [3.1.3.2] bmr2327.str EC [3.2.1.17] bmr1093.str EC [3.2.1.91] bmr192.str EC [3.4.17.2] bmr979.str EC [3.4.21.12] bmr2619.str EC [3.4.21.22] bmr2013.str EC [4.6.1.1] bmr1515.str EC [5.2.1.8] bmr1475.str IgG Fc region-binding protein bmr1120.str Jun leucine zipper domain bmr3394.str P22 arc repressor bmr395.str SWI5 zinc finger bmr780.str Vpq polypeptide bmr810.str Xfin-31B bmr2328.str Xfin-31C bmr2329.str ZFY-switch bmr1911.str actin bmr3036.str adrenocorticotropin bmr356.str alamethicin bmr2545.str alpha 1-purothionin bmr55.str alpha-amylase inhibitor bmr1198.str alpha-bungarotoxin bmr8.str alpha-conotoxin G1 bmr250.str alpha-mating factor bmr1727.str amphipathic alpha helix peptide bmr3404.str amphiphilic alpha-helix peptide Baa17 bmr2202.str annexin I bmr3435.str antimicrobial peptide bmr1710.str ascaris trypsin inhibitor 1 bmr358.str bacteriorhodopsin bmr2282.str beta-endorphin bmr1562.str bovine seminal fluid protein bmr1474.str bull seminal inhibitor IIA bmr146.str cGMP-dependent protein kinase bmr1757.str calcitonin C bmr1403.str carboxypeptidase inhibitor bmr1917.str cardiotoxin VII2 bmr2787.str cecropin A bmr141.str cell adhesion promoting peptide bmr1997.str charybdatoxin bmr114.str chemotactic protein P7K bmr779.str coagulation factor X bmr1071.str cobratoxin bmr1381.str collagen bmr1709.str complement factor H bmr1479.str complement protein C3a bmr440.str complement protein C5a bmr2196.str conotoxin GIIIA bmr1664.str cro repressor bmr1743.str defensin A bmr3456.str dendroaspis bmr132.str designed helical protein bmr1445.str dynorphin A bmr1676.str dynorphin analogue bmr200.str echistatin bmr2061.str endothelin bmr1503.str endothelin-3 bmr1046.str enhancer-binding protein bmr1336.str enterotoxin bmr139.str epidermal growth factor bmr1377.str fibronectin bmr2281.str flavodoxin bmr1379.str galanin bmr372.str glucagon bmr140.str glutaredoxin bmr2151.str glycoprotein D-1 bmr26.str gp120 bmr1885.str growth factor bmr246.str growth hormone releasing factor bmr24.str hirudin bmr27.str histone H5 bmr30.str immunogenic peptide A12-9 bmr2272.str insulin B chain bmr1001.str insulin-like growth factor-I bmr2498.str interleukin 1-beta bmr1061.str interleukin 4 bmr2031.str kappa-bungarotoxin bmr1675.str kininogen bmr1588.str kistrin bmr2856.str leiurotoxin I bmr408.str male-associated protein bmr1500.str melanin concentrating hormone bmr1677.str metallothionein bmr248.str microglobulin bmr3078.str motilin bmr754.str natriuretic peptide bmr1201.str neocarzinostatin bmr1766.str neuropeptide Y bmr548.str neurotensin bmr1697.str neurotoxin I bmr275.str neutrophil NP-5 bmr41.str nisin bmr2279.str nucleic-acid-binding protein bmr1640.str nucleocapsid protein bmr1656.str ocytocin bmr2948.str ovomucoid third domain bmr1374.str p55F1 zinc fingerlike domain bmr252.str pancreatic polypeptide bmr2223.str parathyroid-hormone-related protein bmr1666.str parvalbumin bmr144.str phosphocarrier protein HPr bmr2030.str phospholipid transfer protein bmr2065.str pituitary growth factor bmr2197.str protein L bmr3466.str proteinase inhibitor IIA bmr53.str putidaredoxin bmr2278.str rubredoxin bmr1991.str sapecin bmr1209.str sarafotoxin-S6b bmr1700.str serum albumin bmr1616.str seven-iron ferredoxin bmr1133.str soybean proteinase inhibitor bmr1495.str synthesized signal peptide bmr1137.str tachyplesin I bmr1135.str tendamistat bmr1642.str thymosin beta-4 bmr1065.str toxin ATX III bmr3485.str toxin AaH III bmr2283.str toxin AaH IT bmr1478.str toxin BDS-I bmr480.str toxin RP III bmr300.str transcription factor IIIA bmr420.str transcription factor LFB1 bmr1414.str transcriptional activator ADR1 bmr1496.str transcriptional activator GAL4 bmr1517.str transcriptional regulator GCN4 bmr1447.str transforming growth factor bmr162.str transforming growth factor alph a bmr517.str troponin I bmr2116.str trypsin inhibitor CMTI-I bmr199.str trypsin inhibitor II bmr397.str tubulin binding peptide bmr1338.str tubulin-beta bmr1817.str ubiquitin bmr2573.str vasoactive intestinal peptide bmr1652.str viral coat protein bmr1635.str